University of Patras - Computer Engineering and Informatics Department

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Computational Biology and Bioinformatics Group

Tools

Babet

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Evolutionary - EMC

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Evolutionary SVM - Fuzzy Inference System

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Hybrid GA - KALMAN

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ΗΙΝΤ-ΚΒ

This knowledge base is equipped with information retrieval tools which allows user to produce and extract thein own protein interaction datasets. HINT-KB is not just a simple integrative database, but combines primitive information to produce new knowledge. Specifically, an integrated scoring method, produces confidence scores for every possible PPI and allows for the creation of reliable negative PPI examples which could be used for the training of supervised classification techniques. Furthermore, HINT-KB offers some simple data preprocessing tools concerning normalization and missing values estimation. The content of HINT-KB may be accessed through a user friendly interface which provides forms for the retrieval of positive PPIs, negative PPIs, complete datasets and interactions of simple proteins.

 

Availability: http://150.140.142.24:84/

ncRNAclass Web Tool

http://150.140.142.24:82/

PSO - RBF - modelling

Training RBF neural network using PSO